Structural Biochemistry and interactions

27 Outubro 2023, 14:00 • Bárbara Joana de Almeida Henriques

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Protein structure and folding studies and analysis using CD and ATR-FTIR spectroscopies.

Structural Biochemistry and interactions

27 Outubro 2023, 09:00 • Cláudio Emanuel Moreira Gomes

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Structural Biochemistry and interactions - Protein structure and folding studies and analysis using CD and ATR-FTIR spectroscopies

Tutorials

20 Outubro 2023, 14:00 • Bárbara Joana de Almeida Henriques

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Tutorial on project methodologies and on the structure and contents of the individual monography.

Tutorials

20 Outubro 2023, 09:00 • Bárbara Joana de Almeida Henriques

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Tutorial on project methodologies and on the structure and contents of the individual monography.

Class 02: Study the S100B/Antibody interactions using Molecular Dynamics

13 Outubro 2023, 14:00 • Miguel Machuqueiro

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The basic concepts of MD simulations are introduced and the students should learn the workflow needed to perform MD simulations of protein systems: system setup, energy minimization, initialization of temperature and pressure, and finally, perform some common trajectory analyses. We studied the case of the S100B:nanobody complex and performed a more detailed interpretation of the results, including some strategies on how to plot them with rigor and scientific quality.