mapping QC

3 Abril 2025, 09:30 • Bruno Miguel Santos de Almeida Nevado

QC mapped data
Factors affecting sequencing and mapping success
Simple ways to automate analyses in bash

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SNP calling

3 Abril 2025, 09:00 • Bruno Miguel Santos de Almeida Nevado

Understand vcf file contents
Call SNPs from mapped data
Filtering VCF genotype calls

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Mapping QC

27 Março 2025, 09:30 • Bruno Miguel Santos de Almeida Nevado

QC of mapped data.
Factors affecting sequencing and mapping success
Simple ways to automate analyses in bash

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SNP calling

27 Março 2025, 09:00 • Bruno Miguel Santos de Almeida Nevado

Understand vcf file contents
Call SNPs from mapped data
Filtering VCF genotype calls

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Read mapping and QC

20 Março 2025, 09:30 • Bruno Miguel Santos de Almeida Nevado

Reference genome preparation, read mapping, and QC of mapped reads.

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