Sumários
Multiple sequence alignment.
20 Março 2019, 15:30 • Catia Luisa Santana Calisto Pesquita
CLUSTAL OMEGA. Overview of Pfam. HMMER3 for MSA.
Beyond Single Sequence Alignment.
20 Março 2019, 13:30 • Catia Luisa Santana Calisto Pesquita
Multiple alignments: Principles,Visualizing and interpreting multiple alignments. Examples. Annotation of biological sequences. Identification of conserved domains
Domains for remote homologies. Motifs and domains
3. Sequence alignment.
14 Março 2019, 15:30 • João Ferreira
Online tools for sequence alignment(NCBI and UniProt). BLASTp. BLASTn. PSI-BLAST.
Sequence alignment.
13 Março 2019, 15:30 • Catia Luisa Santana Calisto Pesquita
Online tools for sequence alignment(NCBI and UniProt). BLASTp. BLASTn. PSI-BLAST.
Database Sequence Similarity Search.
13 Março 2019, 13:30 • Catia Luisa Santana Calisto Pesquita
Sequence Alignment with BLAST. Algorithms for automated alignment:Needleman-Wunsch, Smith-Waterman. What is BLAST: Usages, References and motivations. The BLAST Algorithm. Seeding, Extension and Evaluation.BLAST limitations, Example of usage, PSI-BLAST