Functional enrichment analysis

28 Outubro 2020, 13:30 • Margarida Henriques da Gama Carvalho

Tools and strategies to move from a list of genes to functional insights.

Applications of NGS and RNA-seq

21 Outubro 2020, 15:00 • Margarida Henriques da Gama Carvalho

Examples of the use of NGS and RNA-seq in healthcare and biomedical research

Omics databases and DE expression analysis

21 Outubro 2020, 13:30 • Margarida Henriques da Gama Carvalho

Databases and resources for proteomics and metabolomics.

From data table to differential expression in R 

Defining an omics research/analysis project.

NGS data analysis workflows

14 Outubro 2020, 15:00 • Margarida Henriques da Gama Carvalho

Analyzing NGS datasets - work methodologies.

Introduction to genomic data visualization, manipulation and analysis using Galaxy.

Applications to Biomedicine.

NGS data analysis workflows

14 Outubro 2020, 13:30 • Margarida Henriques da Gama Carvalho

1. Understand the global workflow for the analysis of NGS data;
2. Understand the standard quality control steps performed on the raw data using FastQC;
3. Become acquainted with the Galaxy platform;
4. Be able to perform a basic analysis of NGS data on this platform - from QC to genome alignment.